PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv1_021850_tdax.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 356aa    MW: 39639.3 Da    PI: 4.5152
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv1_021850_tdax.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.5e-11190233654
                         HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                 HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                          ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  Bv1_021850_tdax.t1 190 LMAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 233
                         589*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.453184233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.59E-16187253IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.4E-12190239IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-9190233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-15191250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.02E-4191237No hitNo description
CDDcd048737.58E-4282323No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MEMNEDGFLE ELLALRREAW ESTINPSSND HQINGFFSTT TWAFDGLDST LPNTSTTSYD  60
SFSSSIDQPP PITSTLDCSS FFIHPSSSSG PFSPHEPTFP GPGPGPDLGY SMSMMDADDD  120
DNNNNNNNNN DDNIISNNNN NMVSCKAEHS LSSGEIPSPT QLQPGFNIGL CMEKSKSKVK  180
RVEGQPSKNL MAERRRRKRL NDRLSMLRSV VPKISKMDRT SILGDTIDYM KELLERINKL  240
QEEVDLGSNQ LNLMSIFKDM KPNDVLVRNS PKFDVERRNV DTKVEICCAG KPGLLLSTVT  300
TLEAMGLEIQ QCVISCFNDF SLQASCDEEM EQKSLINSED IKQALFRNAG YGGRCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1192199ERRRRKRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010692682.10.0PREDICTED: transcription factor bHLH93
SwissprotQ9LSL12e-86BH093_ARATH; Transcription factor bHLH93
TrEMBLA0A0J8BE450.0A0A0J8BE45_BETVU; Uncharacterized protein
STRINGPGSC0003DMT4000163601e-116(Solanum tuberosum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.14e-87beta HLH protein 93